TMPRSS6

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TMPRSS6 mutation is significantly associated with the total protein of many other genes, with 34 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TMPRSS6-associated genes across cancer lineages are Cyclin-E2, Ku80, and Annexin-1. Each is linked with TMPRSS6 in more than 2 cancer types. Because this analysis shows association rather than direction, both TMPRSS6-to-partner and partner-to-TMPRSS6 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TMPRSS6→partner) and Y-score (partner→TMPRSS6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMCyclin-E2 →+0.180+2.182.014.03333
UCECKu80 →+0.315+2.515<.001.00132
UCECAnnexin-1 →+0.739+2.827<.001.00132
UCECSTAT3_pY705 →-0.260-1.584.011.03632
UCECBak →+0.226+2.000.021.03032
UCECCaspase-8 →-0.223-3.295.024.00932
Each partner links to its Q-omics profile. Showing the 6 strongest of 34 associations by consensus.

Exploration