TMPRSS15

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TMPRSS15 mutation is significantly associated with the RNA expression of many other genes, with 5,515 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TMPRSS15-associated genes across cancer lineages are HMGB1P32, GBP1P1, and ALMS1-IT1. Each is linked with TMPRSS15 in more than 3 cancer types. Because this analysis shows association rather than direction, both TMPRSS15-to-partner and partner-to-TMPRSS15 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, HMGB1P32 grouped by TMPRSS15-low versus TMPRSS15-high in LGG.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TMPRSS15→partner) and Y-score (partner→TMPRSS15) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LGGHMGB1P32 →+0.059+4.660<.001.00533
UCECGBP1P1 →+0.585+2.425.001.00133
LUSCALMS1-IT1 →+0.454+1.438<.001.00633
SARCLINC02791 →+0.087+4.954<.001.00433
UCECESS2 →+0.238+3.169.001<.00133
UCECE2F1 →+0.751+1.747<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,515 associations by consensus.

HMGB1P32 by TMPRSS15 expression — LGG

Box plot of HMGB1P32 in TMPRSS15-low vs TMPRSS15-high samples in LGG.

Explore this box plot interactively →

Exploration