TMEM63C

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TMEM63C RNA expression is significantly associated with the protein abundance of many other proteins, with 20,000 significant associations in total. GBM shows the largest number of these associations.

The most reproducible TMEM63C-associated proteins across cancer lineages are ISG20, NFKB2, and PLCG2. Each is linked with TMEM63C in more than 4 cancer types. Because this analysis shows association rather than direction, both TMEM63C-to-partner and partner-to-TMEM63C results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TMEM63C versus ISG20 in LSCC, with a Pearson correlation of -0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (TMEM63C→partner) and Y-score (partner→TMEM63C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCISG20 →-0.516-0.611<.001<.00135
GBMNFKB2 →-0.313-0.635<.001<.00135
LSCCPLCG2 →-0.517-0.604<.001<.00135
BRCATNFAIP3 →-0.519-1.577<.001<.00134
BRCAPRODH →+0.576+0.975.001<.00134
LSCCDNAJC1 →-0.388-0.630<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 20,000 associations by consensus.

TMEM63C vs ISG20 — LSCC

Per-sample scatter of TMEM63C vs ISG20 in LSCC (Pearson r = -0.40).

Explore this scatter interactively →

Exploration