TMEM208

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TMEM208 protein abundance is significantly associated with the RNA expression of many other genes, with 3,662 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible TMEM208-associated genes across cancer lineages are USP11, MMP24, and LRP3. Each is linked with TMEM208 in more than 1 cancer types. Because this analysis shows association rather than direction, both TMEM208-to-partner and partner-to-TMEM208 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TMEM208 versus USP11 in UCEC, with a Pearson correlation of -0.37.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TMEM208→partner) and Y-score (partner→TMEM208) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECUSP11 →-0.729-0.689<.001.00132
LSCCMMP24 →-0.416-0.243.001.00232
UCECLRP3 →-0.792-0.573.009.00332
UCECZNF589 →-0.514-0.538<.001<.00132
LSCCLRRC75A →-0.537-0.266<.001<.00132
LSCCSNHG32 →-0.645-0.314.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,662 associations by consensus.

TMEM208 vs USP11 — UCEC

Per-sample scatter of TMEM208 vs USP11 in UCEC (Pearson r = -0.37).

Explore this scatter interactively →

Exploration