TMEM19

mass-spec protein — tumor vs normal
Tumor vs Normalmass-specBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, TMEM19 mass-spec protein differs between tumor and matched normal tissue in 4 of 18 cancer types tested, making tumor–normal expression one of TMEM19’s most consistent transcriptional readouts.

The strongest signal is observed in lung squamous cell carcinoma (LSCC), where TMEM19 mass-spec protein is more highly expressed in tumor relative to normal tissue. In most cancer types TMEM19 is over-expressed in tumor, although a few such as COAD and CCRCC show the opposite, repressed pattern.

LSCC, COAD, and HNSC are the cancer types where TMEM19 tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in TMEM19 mass-spec protein (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LSCCFemaleAll+0.472<.0018view →
COADFemaleAll−0.268.0046view →
HNSCMaleAll+0.294.0014view →
CCRCCAllAll−0.299<.0013view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 4 strongest of 4 lineages.

TMEM19–LSCC

Tumor-vs-normal mass-spec protein box plot for TMEM19 in LSCC.

Open the LSCC breakdown →

Exploration