TMEM154

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TMEM154 mutation is significantly associated with the total protein of many other genes, with 29 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TMEM154-associated genes across cancer lineages are EGFR_pY1068, A-Raf_pS299, and FoxM1. Each is linked with TMEM154 in more than 1 cancer types. Because this analysis shows association rather than direction, both TMEM154-to-partner and partner-to-TMEM154 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, EGFR_pY1068 grouped by TMEM154-low versus TMEM154-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TMEM154→partner) and Y-score (partner→TMEM154) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECEGFR_pY1068 →-0.249-2.222.019.01131
UCECA-Raf_pS299 →-0.130-3.169.010.01831
UCECFoxM1 →+0.240+2.222.029.01131
UCECACVRL1 →-0.131-2.439.023.01931
UCECJNK_pT183_Y185 →-0.184-2.209.010.01131
UCECJNK2 →+0.235+1.884.005.03031
Each partner links to its Q-omics profile. Showing the 6 strongest of 29 associations by consensus.

EGFR_pY1068 by TMEM154 expression — UCEC

Box plot of EGFR_pY1068 in TMEM154-low vs TMEM154-high samples in UCEC.

Explore this box plot interactively →

Exploration