TMEM144

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TMEM144 mutation is significantly associated with the RNA expression of many other genes, with 2,103 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TMEM144-associated genes across cancer lineages are CYFIP1, TAF9, and SOCS7. Each is linked with TMEM144 in more than 1 cancer types. Because this analysis shows association rather than direction, both TMEM144-to-partner and partner-to-TMEM144 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CYFIP1 grouped by TMEM144-low versus TMEM144-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TMEM144→partner) and Y-score (partner→TMEM144) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCYFIP1 →+0.543+3.483.002.00232
UCECTAF9 →+0.642+3.584<.001.00232
UCECSOCS7 →+0.666+2.592<.001.00632
COADCICP10 →+0.230+3.452.005.00932
COADMIR4306 →+0.672+3.843<.001.00432
UCECCOX15 →+0.521+3.000<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,103 associations by consensus.

CYFIP1 by TMEM144 expression — UCEC

Box plot of CYFIP1 in TMEM144-low vs TMEM144-high samples in UCEC.

Explore this box plot interactively →

Exploration