TMEM101

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, TMEM101 mutation is significantly associated with the RNA expression of many other genes, with 7 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible TMEM101-associated genes across cancer lineages are LCN1, PRM3, and TMEM239. Each is linked with TMEM101 in more than 1 cancer types. Because this analysis shows association rather than direction, both TMEM101-to-partner and partner-to-TMEM101 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LCN1 grouped by TMEM101-low versus TMEM101-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TMEM101→partner) and Y-score (partner→TMEM101) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaLCN1 →+0.030+4.922.002.00931
BLOOD_LeukemiaPRM3 →+0.090+6.569<.001<.00131
BLOOD_LeukemiaTMEM239 →+0.086+5.201<.001.00631
BLOOD_LeukemiaSPATA31A7 →+0.038+5.539<.001.00331
LARGE_INTESTINESTRA8 →+0.215+5.415<.001.00431
LARGE_INTESTINEZNF804B →+0.022+5.415<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 7 associations by consensus.

LCN1 by TMEM101 expression — BLOOD_Leukemia

Box plot of LCN1 in TMEM101-low vs TMEM101-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration