TMCC2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, TMCC2 protein abundance is significantly associated with the go_rna of many other GO terms, with 1,698 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible TMCC2-associated GO terms across cancer lineages are Modification of synaptic structure, Positive regulation of muscle cell differentiation, and Regulation of biological process involved in symbiotic interaction. Each is linked with TMCC2 in more than 5 cancer types. Because this analysis shows association rather than direction, both TMCC2-to-partner and partner-to-TMCC2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Modification of synaptic structure grouped by TMCC2-low versus TMCC2-high in LARGE_INTESTINE.

protein abundance associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (TMCC2→partner) and Y-score (partner→TMCC2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEModification of synaptic structure →+0.074+0.774.007.00636
SOFT_TISSUEPositive regulation of muscle cell differentiation →-0.115-1.072<.001.00535
BLOOD_LymphomaRegulation of biological process involved in symbiotic interaction →+0.125+1.074.004.00135
BLOOD_LymphomaNuclear receptor-mediated signaling pathway →+0.058+1.164.004.00335
CNSViral life cycle →+0.060+0.704<.001<.00135
CNSBiological process involved in symbiotic interaction →+0.085+0.710<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,698 associations by consensus.

Modification of synaptic structure by TMCC2 expression — LARGE_INTESTINE

Box plot of Modification of synaptic structure in TMCC2-low vs TMCC2-high samples in LARGE_INTESTINE.

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Exploration