TMC2

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TMC2 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,642 significant associations in total. GBM shows the largest number of these associations.

The most reproducible TMC2-associated proteins across cancer lineages are PRKAR2B, TCEAL1, and FNDC3B. Each is linked with TMC2 in more than 3 cancer types. Because this analysis shows association rather than direction, both TMC2-to-partner and partner-to-TMC2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TMC2 versus PRKAR2B in OV, with a Pearson correlation of 0.31.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (TMC2→partner) and Y-score (partner→TMC2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVPRKAR2B →+0.586+0.164.001.00534
LSCCTCEAL1 →+0.296+0.229<.001.00134
GBMFNDC3B →-0.544-0.503<.001.00134
LSCCMAP2_S1155 →+1.179+0.208<.001<.00134
LUADPHC3 →+0.249+0.143<.001.00334
GBMP4HB →-0.526-0.431<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,642 associations by consensus.

TMC2 vs PRKAR2B — OV

Per-sample scatter of TMC2 vs PRKAR2B in OV (Pearson r = 0.31).

Explore this scatter interactively →

Exploration