TMA16

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, TMA16 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,206 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible TMA16-associated GO terms across cancer lineages are Endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA), IMP biosynthetic process, and Nuclear polyadenylation-dependent rRNA catabolic process. Each is linked with TMA16 in more than 14 cancer types. Because this analysis shows association rather than direction, both TMA16-to-partner and partner-to-TMA16 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (TMA16→partner) and Y-score (partner→TMA16) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SOFT_TISSUEEndonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) →+0.113+0.692<.001<.001314
BREASTIMP biosynthetic process →+0.162+0.639<.001.001314
URINARY_TRACTNuclear polyadenylation-dependent rRNA catabolic process →+0.108+0.660.004.001215
URINARY_TRACTTRAMP-dependent tRNA surveillance pathway →+0.108+0.660.004.001215
LUNG_NSCLC_LUSCU4 snRNA 3'-end processing →+0.177+1.089<.001.007314
UPPER_AERODIGESTIVE_TRACTKinetochore assembly →+0.143+0.880.003.002314
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,206 associations by consensus.

Exploration