TM9SF3

Across TCGA patient cohorts, TM9SF3 protein abundance is significantly associated with the RNA expression of many other genes, with 11,157 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible TM9SF3-associated genes across cancer lineages are TEX21P, TTC7B, and KLHL5. Each is linked with TM9SF3 in more than 4 cancer types. Because this analysis shows association rather than direction, both TM9SF3-to-partner and partner-to-TM9SF3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TM9SF3 versus TEX21P in GBM, with a Pearson correlation of -0.36.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TM9SF3→partner) and Y-score (partner→TM9SF3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	TEX21P →	-0.543	-0.272	<.001	.001	3	5
LUAD	TTC7B →	-0.346	-0.251	<.001	.006	3	5
COAD	KLHL5 →	-0.589	-0.278	.003	.001	3	4
BRCA	LRRC8C →	-0.546	-0.414	<.001	.002	3	4
COAD	ARID5A →	-0.557	-0.231	<.001	.003	3	4
COAD	SGTB →	-0.399	-0.245	.004	.004	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,157 associations by consensus.

TM9SF3 vs TEX21P — GBM

Explore this scatter interactively →