TM9SF1

Across TCGA patient cohorts, TM9SF1 protein abundance is significantly associated with the RNA expression of many other genes, with 14,427 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible TM9SF1-associated genes across cancer lineages are RGS10, LTB, and CYTH4. Each is linked with TM9SF1 in more than 8 cancer types. Because this analysis shows association rather than direction, both TM9SF1-to-partner and partner-to-TM9SF1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TM9SF1 versus RGS10 in GBM, with a Pearson correlation of 0.87.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TM9SF1→partner) and Y-score (partner→TM9SF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	RGS10 →	+1.080	+0.715	<.001	<.001	3	9
HNSC	LTB →	+1.120	+0.356	<.001	<.001	3	9
GBM	CYTH4 →	+0.931	+0.590	<.001	<.001	3	8
LUAD	APOBEC3H →	+0.780	+0.501	<.001	<.001	3	8
COAD	GZMH →	+1.523	+0.306	<.001	<.001	3	8
HNSC	SLA2 →	+0.919	+0.398	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,427 associations by consensus.

TM9SF1 vs RGS10 — GBM

Explore this scatter interactively →