TM4SF18

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TM4SF18 mutation is significantly associated with the total protein of many other genes, with 7 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TM4SF18-associated genes across cancer lineages are PRDX1, STAT3_pY705, and TFRC. Each is linked with TM4SF18 in more than 1 cancer types. Because this analysis shows association rather than direction, both TM4SF18-to-partner and partner-to-TM4SF18 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PRDX1 grouped by TM4SF18-low versus TM4SF18-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TM4SF18→partner) and Y-score (partner→TM4SF18) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPRDX1 →+0.251+3.000.035.03732
UCECSTAT3_pY705 →-0.497-2.990.001.03631
UCECTFRC →+1.144+3.000<.001.03631
UCECJNK_pT183_Y185 →-0.273-2.986.005.03711
UCECMEK1 →+0.469+3.000.026.03711
UCECc-Jun_pS73 →-0.206-3.000.025.03711
Each partner links to its Q-omics profile. Showing the 6 strongest of 7 associations by consensus.

PRDX1 by TM4SF18 expression — UCEC

Box plot of PRDX1 in TM4SF18-low vs TM4SF18-high samples in UCEC.

Explore this box plot interactively →

Exploration