TM2D3

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TM2D3 mutation is significantly associated with the total protein of many other genes, with 39 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TM2D3-associated genes across cancer lineages are Heregulin, JNK2, and MEK1. Each is linked with TM2D3 in more than 1 cancer types. Because this analysis shows association rather than direction, both TM2D3-to-partner and partner-to-TM2D3 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TM2D3→partner) and Y-score (partner→TM2D3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECHeregulin →-0.162-2.321.006.03431
UCECJNK2 →+0.354+3.009<.001.01931
UCECMEK1 →+0.439+2.321.013.03431
UCECMyosin-IIa_pS1943 →+0.252+2.472.011.01131
UCECp62 Lck ligand →+0.358+3.179.023.01031
UCECp70-S6K_pT389 →-0.241-3.169.008.01831
Each partner links to its Q-omics profile. Showing the 6 strongest of 39 associations by consensus.

Exploration