TLCD4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TLCD4 mutation is significantly associated with the total protein of many other genes, with 5 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TLCD4-associated genes across cancer lineages are C-Raf, FASN, and Caveolin-1. Each is linked with TLCD4 in more than 1 cancer types. Because this analysis shows association rather than direction, both TLCD4-to-partner and partner-to-TLCD4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, C-Raf grouped by TLCD4-low versus TLCD4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TLCD4→partner) and Y-score (partner→TLCD4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECC-Raf →+0.212+3.000.010.03731
UCECFASN →+0.464+3.000.042.03721
UCECCaveolin-1 →-1.023-3.000.014.03621
UCECMEK1 →+0.685+3.000.001.03711
UCECTFRC →+0.655+3.000.032.03711
Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

C-Raf by TLCD4 expression — UCEC

Box plot of C-Raf in TLCD4-low vs TLCD4-high samples in UCEC.

Explore this box plot interactively →

Exploration