TLCD2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TLCD2 protein abundance is significantly associated with the RNA expression of many other genes, with 187 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible TLCD2-associated genes across cancer lineages are SFXN3, YWHAE, and DPH1. Each is linked with TLCD2 in more than 1 cancer types. Because this analysis shows association rather than direction, both TLCD2-to-partner and partner-to-TLCD2 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TLCD2→partner) and Y-score (partner→TLCD2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADSFXN3 →-0.540-0.433.008.00231
LUADYWHAE →+0.270+0.380.008<.00131
LUADDPH1 →+0.283+0.453.003<.00131
LUADRNGTT →+0.279+0.468.005.00631
LUADCCNC →+0.344+0.506.001.00131
LUADTFAP2E →+0.721+0.411<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 187 associations by consensus.

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