TIMM29

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TIMM29 protein abundance is significantly associated with the RNA expression of many other genes, with 10,112 significant associations in total. GBM shows the largest number of these associations.

The most reproducible TIMM29-associated genes across cancer lineages are AGPAT4, TNFAIP6, and CYTOR. Each is linked with TIMM29 in more than 5 cancer types. Because this analysis shows association rather than direction, both TIMM29-to-partner and partner-to-TIMM29 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TIMM29 versus AGPAT4 in BRCA, with a Pearson correlation of -0.30.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TIMM29→partner) and Y-score (partner→TIMM29) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAAGPAT4 →-0.684-0.377<.001<.00136
COADTNFAIP6 →-1.005-0.161.003.00736
LSCCCYTOR →-0.648-0.249<.001<.00136
COADLILRA5 →-0.768-0.171<.001.00436
CCRCCLILRB5 →-0.847-0.266.001<.00126
OVPIK3CD →-0.795-0.266<.001.00435
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,112 associations by consensus.

TIMM29 vs AGPAT4 — BRCA

Per-sample scatter of TIMM29 vs AGPAT4 in BRCA (Pearson r = -0.30).

Explore this scatter interactively →

Exploration