THEM4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, THEM4 mutation is significantly associated with the total protein of many other genes, with 3 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible THEM4-associated genes across cancer lineages are Ku80, p62 Lck ligand, and IGFBP2. Each is linked with THEM4 in more than 1 cancer types. Because this analysis shows association rather than direction, both THEM4-to-partner and partner-to-THEM4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Ku80 grouped by THEM4-low versus THEM4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (THEM4→partner) and Y-score (partner→THEM4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECKu80 →+0.333+2.817.010.03631
UCECp62 Lck ligand →+0.374+2.817.036.03631
UCECIGFBP2 →-0.921-3.169.009.02021
Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

Ku80 by THEM4 expression — UCEC

Box plot of Ku80 in THEM4-low vs THEM4-high samples in UCEC.

Explore this box plot interactively →

Exploration