THADA

mutation — cross-omics
Cross-omicsMUTATION → MUTATIONCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, THADA mutation is significantly associated with the mutation status of many other genes, with 5,853 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible THADA-associated genes across cancer lineages are PRKCI, RIMS1, and ATRX. Each is linked with THADA in more than 4 cancer types. Because this analysis shows association rather than direction, both THADA-to-partner and partner-to-THADA results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PRKCI grouped by THADA-low versus THADA-high in KIDNEY.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (THADA→partner) and Y-score (partner→THADA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
KIDNEYPRKCI →+5.000+5.000.006.00615
KIDNEYRIMS1 →+5.000+5.000.006.00615
BONEATRX →+3.655+3.954.003.00315
BLOOD_LeukemiaSCN4A →+2.545+2.545.001.00115
UPPER_AERODIGESTIVE_TRACTCOL5A1 →+3.023+4.485.001.00115
BLOOD_LymphomaDNAH2 →+2.731+3.289.003.00315
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,853 associations by consensus.

PRKCI by THADA expression — KIDNEY

Box plot of PRKCI in THADA-low vs THADA-high samples in KIDNEY.

Explore this box plot interactively →

Exploration