TGM1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TGM1 mutation is significantly associated with the total protein of many other genes, with 55 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TGM1-associated genes across cancer lineages are Caspase-7-cleavedD198, 4E-BP1, and PDK1_pS241. Each is linked with TGM1 in more than 3 cancer types. Because this analysis shows association rather than direction, both TGM1-to-partner and partner-to-TGM1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Caspase-7-cleavedD198 grouped by TGM1-low versus TGM1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TGM1→partner) and Y-score (partner→TGM1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCaspase-7-cleavedD198 →+0.667+2.189<.001.00134
SKCM4E-BP1 →+0.398+2.502<.001.00133
COADPDK1_pS241 →-0.179-3.313.023.01032
SKCMFOXO3a_pS318_S321 →-0.104-2.982.048.03432
SKCMACC1 →+0.367+2.000.002.00932
SKCMRb_pS807_S811 →+0.494+2.000.003.00932
Each partner links to its Q-omics profile. Showing the 6 strongest of 55 associations by consensus.

Caspase-7-cleavedD198 by TGM1 expression — UCEC

Box plot of Caspase-7-cleavedD198 in TGM1-low vs TGM1-high samples in UCEC.

Explore this box plot interactively →

Exploration