TFRC

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TFRC mutation is significantly associated with the total protein of many other genes, with 39 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TFRC-associated genes across cancer lineages are FASN, Cyclin-E2, and EGFR_pY1068. Each is linked with TFRC in more than 1 cancer types. Because this analysis shows association rather than direction, both TFRC-to-partner and partner-to-TFRC results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FASN grouped by TFRC-low versus TFRC-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TFRC→partner) and Y-score (partner→TFRC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECFASN →+0.424+2.459.002.01832
UCECCyclin-E2 →+0.208+2.817<.001.00132
UCECEGFR_pY1068 →-0.214-1.584.017.01931
UCECeIF4E →+0.230+3.920.002<.00131
UCECA-Raf_pS299 →-0.116-3.169.007.01831
UCECERK2 →+0.220+2.584.001.01031
Each partner links to its Q-omics profile. Showing the 6 strongest of 39 associations by consensus.

FASN by TFRC expression — UCEC

Box plot of FASN in TFRC-low vs TFRC-high samples in UCEC.

Explore this box plot interactively →

Exploration