TEX2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TEX2 protein abundance is significantly associated with the RNA expression of many other genes, with 8,097 significant associations in total. GBM shows the largest number of these associations.

The most reproducible TEX2-associated genes across cancer lineages are CORO2A, CCDC47, and FTSJ3. Each is linked with TEX2 in more than 3 cancer types. Because this analysis shows association rather than direction, both TEX2-to-partner and partner-to-TEX2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TEX2 versus CORO2A in LSCC, with a Pearson correlation of 0.43.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TEX2→partner) and Y-score (partner→TEX2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCCORO2A →+0.755+0.177<.001<.00134
BRCACCDC47 →+0.644+0.585.001<.00133
HNSCFTSJ3 →+0.513+0.205.005.00624
OVSMARCD2 →+0.537+0.331<.001<.00133
LSCCMIF4GD →+0.387+0.173<.001<.00133
LSCCTACO1 →+0.612+0.236<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,097 associations by consensus.

TEX2 vs CORO2A — LSCC

Per-sample scatter of TEX2 vs CORO2A in LSCC (Pearson r = 0.43).

Explore this scatter interactively →

Exploration