TCTN3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TCTN3 mutation is significantly associated with the RNA expression of many other genes, with 254 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TCTN3-associated genes across cancer lineages are ZNF734P, RNA5SP387, and LINC02854. Each is linked with TCTN3 in more than 1 cancer types. Because this analysis shows association rather than direction, both TCTN3-to-partner and partner-to-TCTN3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ZNF734P grouped by TCTN3-low versus TCTN3-high in BRCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TCTN3→partner) and Y-score (partner→TCTN3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAZNF734P →+0.090+5.646.001.00432
BRCARNA5SP387 →+1.626+5.288<.001.00632
SKCMLINC02854 →+0.037+5.488<.001.00132
SKCMPRELID3BP2 →+0.102+5.488<.001.00132
COADOR9Q2 →+0.047+4.721<.001.00432
COADMTCO1P56 →+0.275+4.917<.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 254 associations by consensus.

ZNF734P by TCTN3 expression — BRCA

Box plot of ZNF734P in TCTN3-low vs TCTN3-high samples in BRCA.

Explore this box plot interactively →

Exploration