TBL1Y

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TBL1Y mutation is significantly associated with the RNA expression of many other genes, with 41 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible TBL1Y-associated genes across cancer lineages are RN7SL711P, OR2BH1P, and RPL3P13. Each is linked with TBL1Y in more than 1 cancer types. Because this analysis shows association rather than direction, both TBL1Y-to-partner and partner-to-TBL1Y results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL711P grouped by TBL1Y-low versus TBL1Y-high in LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TBL1Y→partner) and Y-score (partner→TBL1Y) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUSCRN7SL711P →+0.323+3.849<.001.00832
SKCMOR2BH1P →+0.029+5.810<.001<.00132
SKCMRPL3P13 →+0.234+3.526<.001.00531
SKCMPSMB7P1 →+0.045+4.469<.001.00631
LUSCOR2V1 →+0.261+3.884<.001.00631
LUSCRNU6-784P →+0.394+4.070<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 41 associations by consensus.

RN7SL711P by TBL1Y expression — LUSC

Box plot of RN7SL711P in TBL1Y-low vs TBL1Y-high samples in LUSC.

Explore this box plot interactively →

Exploration