TBC1D9

Across TCGA patient cohorts, TBC1D9 protein abundance is significantly associated with the RNA expression of many other genes, with 13,895 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible TBC1D9-associated genes across cancer lineages are CD4, MS4A6A, and LY86. Each is linked with TBC1D9 in more than 3 cancer types. Because this analysis shows association rather than direction, both TBC1D9-to-partner and partner-to-TBC1D9 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TBC1D9 versus CD4 in HNSC, with a Pearson correlation of 0.39.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TBC1D9→partner) and Y-score (partner→TBC1D9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	CD4 →	+0.832	+0.647	.002	.001	3	4
HNSC	MS4A6A →	+1.072	+0.607	.002	.003	3	4
LSCC	LY86 →	+0.879	+0.235	<.001	<.001	3	4
GBM	PTGER4 →	+0.851	+0.336	<.001	.001	3	4
GBM	LINC01480 →	+0.972	+0.400	<.001	<.001	3	4
HNSC	MILR1 →	+0.920	+0.582	.001	.005	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,895 associations by consensus.

TBC1D9 vs CD4 — HNSC

Explore this scatter interactively →