TBC1D2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TBC1D2 protein abundance is significantly associated with the RNA expression of many other genes, with 17,159 significant associations in total. GBM shows the largest number of these associations.

The most reproducible TBC1D2-associated genes across cancer lineages are GNA15, GJB2, and OSTF1. Each is linked with TBC1D2 in more than 6 cancer types. Because this analysis shows association rather than direction, both TBC1D2-to-partner and partner-to-TBC1D2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TBC1D2 versus GNA15 in GBM, with a Pearson correlation of 0.62.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TBC1D2→partner) and Y-score (partner→TBC1D2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMGNA15 →+0.971+0.513<.001<.00137
BRCAGJB2 →+1.698+0.358<.001<.00137
GBMOSTF1 →+0.737+0.499<.001<.00136
HNSCCSTB →+1.218+0.404.003.00327
CCRCCCORO2A →+1.038+0.413<.001<.00136
HNSCNIBAN2 →+1.143+0.530<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 17,159 associations by consensus.

TBC1D2 vs GNA15 — GBM

Per-sample scatter of TBC1D2 vs GNA15 in GBM (Pearson r = 0.62).

Explore this scatter interactively →

Exploration