TBC1D1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TBC1D1 mutation is significantly associated with the total protein of many other genes, with 48 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TBC1D1-associated genes across cancer lineages are p38-MAPK_pT180_Y182, PKC-delta_pS664, and eEF2. Each is linked with TBC1D1 in more than 2 cancer types. Because this analysis shows association rather than direction, both TBC1D1-to-partner and partner-to-TBC1D1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, p38-MAPK_pT180_Y182 grouped by TBC1D1-low versus TBC1D1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TBC1D1→partner) and Y-score (partner→TBC1D1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECp38-MAPK_pT180_Y182 →-0.444-1.986.005.00333
SKCMPKC-delta_pS664 →-0.130-2.459.047.01833
UCECeEF2 →+0.264+1.874.036.04932
UCECMEK1 →+0.495+2.392<.001<.00132
UCECp62 Lck ligand →+0.445+3.916<.001<.00132
UCECp90 RSK_pT359_S363 →-0.146-2.000.041.02932
Each partner links to its Q-omics profile. Showing the 6 strongest of 48 associations by consensus.

p38-MAPK_pT180_Y182 by TBC1D1 expression — UCEC

Box plot of p38-MAPK_pT180_Y182 in TBC1D1-low vs TBC1D1-high samples in UCEC.

Explore this box plot interactively →

Exploration