TAS2R1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TAS2R1 mutation is significantly associated with the RNA expression of many other genes, with 1,885 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TAS2R1-associated genes across cancer lineages are KCNQ1, SUPV3L1, and RPP14. Each is linked with TAS2R1 in more than 3 cancer types. Because this analysis shows association rather than direction, both TAS2R1-to-partner and partner-to-TAS2R1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, KCNQ1 grouped by TAS2R1-low versus TAS2R1-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TAS2R1→partner) and Y-score (partner→TAS2R1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMKCNQ1 →-0.488-3.409.004.00534
UCECSUPV3L1 →+0.485+3.711.002<.00133
UCECRPP14 →+0.415+3.732.003<.00133
LUSCMTO1 →+0.341+3.204.005.00933
LUSCMIR1305 →+0.259+3.059<.001.00933
SKCMMRPL34 →+0.355+1.945.002.00333
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,885 associations by consensus.

KCNQ1 by TAS2R1 expression — SKCM

Box plot of KCNQ1 in TAS2R1-low vs TAS2R1-high samples in SKCM.

Explore this box plot interactively →

Exploration