TARS2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TARS2 mutation is significantly associated with the RNA expression of many other genes, with 1,474 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TARS2-associated genes across cancer lineages are NIPA1, POLH-AS1, and TRIM64EP. Each is linked with TARS2 in more than 2 cancer types. Because this analysis shows association rather than direction, both TARS2-to-partner and partner-to-TARS2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, NIPA1 grouped by TARS2-low versus TARS2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TARS2→partner) and Y-score (partner→TARS2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECNIPA1 →+0.798+2.906<.001.00133
UCECPOLH-AS1 →+0.581+2.329<.001.00333
LIHCTRIM64EP →+0.034+4.647.004.00732
LIHCLINC02632 →+0.049+5.305<.001.00332
LIHCMARK2P5 →+0.097+6.129<.001<.00132
LIHCLINC02420 →+0.120+4.544<.001.00932
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,474 associations by consensus.

NIPA1 by TARS2 expression — UCEC

Box plot of NIPA1 in TARS2-low vs TARS2-high samples in UCEC.

Explore this box plot interactively →

Exploration