TAPBP

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TAPBP protein abundance is significantly associated with the RNA expression of many other genes, with 12,648 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible TAPBP-associated genes across cancer lineages are TNFSF13B, OAS2, and STAT1. Each is linked with TAPBP in more than 9 cancer types. Because this analysis shows association rather than direction, both TAPBP-to-partner and partner-to-TAPBP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TAPBP versus TNFSF13B in OV, with a Pearson correlation of 0.42.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TAPBP→partner) and Y-score (partner→TAPBP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVTNFSF13B →+0.940+0.386<.001<.001310
OVOAS2 →+1.680+0.695<.001<.001310
LSCCSTAT1 →+1.148+0.781<.001<.001310
HNSCIFIT3 →+1.560+0.494<.001<.001310
HNSCZBP1 →+1.143+0.469<.001<.001310
COADIRF1 →+1.101+0.518<.001<.001310
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,648 associations by consensus.

TAPBP vs TNFSF13B — OV

Per-sample scatter of TAPBP vs TNFSF13B in OV (Pearson r = 0.42).

Explore this scatter interactively →

Exploration