TAFA4

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, TAFA4 RNA expression is significantly associated with the go_rna of many other GO terms, with 726 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible TAFA4-associated GO terms across cancer lineages are Extracellular structure organization, Calcium ion transmembrane transport, and Extracellular matrix organization. Each is linked with TAFA4 in more than 5 cancer types. Because this analysis shows association rather than direction, both TAFA4-to-partner and partner-to-TAFA4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Extracellular structure organization grouped by TAFA4-low versus TAFA4-high in LUNG_SCLC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (TAFA4→partner) and Y-score (partner→TAFA4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCExtracellular structure organization →-0.072-0.951.003.00336
LUNG_NSCLC_LUSCCalcium ion transmembrane transport →-0.060-0.173.001.00436
LUNG_SCLCExtracellular matrix organization →-0.073-1.093.003<.00136
LUNG_SCLCExternal encapsulating structure organization →-0.071-1.093.003<.00136
LUNG_SCLCNegative regulation of peptidase activity →-0.300-0.868.008.00935
OVARYEstablishment of protein localization to organelle →+0.041+0.772<.001.00335
Each partner links to its Q-omics profile. Showing the 6 strongest of 726 associations by consensus.

Extracellular structure organization by TAFA4 expression — LUNG_SCLC

Box plot of Extracellular structure organization in TAFA4-low vs TAFA4-high samples in LUNG_SCLC.

Explore this box plot interactively →

Exploration