TAF9

Across TCGA cell cohorts, TAF9 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,349 significant associations in total. UPPER_AERODIGESTIVE_TRACT shows the largest number of these associations.

The most reproducible TAF9-associated GO terms across cancer lineages are Nucleotide-excision repair, Positive regulation of rRNA processing, and tRNA wobble cytosine modification. Each is linked with TAF9 in more than 11 cancer types. Because this analysis shows association rather than direction, both TAF9-to-partner and partner-to-TAF9 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Nucleotide-excision repair grouped by TAF9-low versus TAF9-high in UPPER_AERODIGESTIVE_TRACT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (TAF9→partner) and Y-score (partner→TAF9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UPPER_AERODIGESTIVE_TRACT	Nucleotide-excision repair →	+0.085	+0.929	<.001	<.001	3	12
OVARY	Positive regulation of rRNA processing →	+0.141	+0.969	<.001	.001	3	11
UPPER_AERODIGESTIVE_TRACT	tRNA wobble cytosine modification →	+0.087	+0.977	<.001	<.001	3	11
LARGE_INTESTINE	Mammary gland development →	-0.069	-0.316	.001	.006	3	11
LUNG_SCLC	Positive regulation of ligase activity →	+0.114	+0.768	<.001	.002	3	11
LIVER	Gland development →	-0.075	-0.961	.002	.003	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,349 associations by consensus.

Nucleotide-excision repair by TAF9 expression — UPPER_AERODIGESTIVE_TRACT

Explore this box plot interactively →