TADA3

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, TADA3 mutation is significantly associated with the RNA expression of many other genes, with 9 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible TADA3-associated genes across cancer lineages are MT1B, OR51A4, and SMIM28. Each is linked with TADA3 in more than 1 cancer types. Because this analysis shows association rather than direction, both TADA3-to-partner and partner-to-TADA3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MT1B grouped by TADA3-low versus TADA3-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TADA3→partner) and Y-score (partner→TADA3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINMT1B →+0.076+4.415<.001.00731
SKINOR51A4 →+0.010+5.022<.001.00231
SKINSMIM28 →+0.020+5.022<.001.00231
LARGE_INTESTINESCN11A →+0.112+3.772.003.00731
LARGE_INTESTINETAFA1 →+0.234+3.103.002.00431
LARGE_INTESTINERSC1A1 →+0.795+3.519.007.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

MT1B by TADA3 expression — SKIN

Box plot of MT1B in TADA3-low vs TADA3-high samples in SKIN.

Explore this box plot interactively →

Exploration