SZT2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SZT2 mutation is significantly associated with the RNA expression of many other genes, with 9,910 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SZT2-associated genes across cancer lineages are SKA1, OIP5, and WDR45B. Each is linked with SZT2 in more than 5 cancer types. Because this analysis shows association rather than direction, both SZT2-to-partner and partner-to-SZT2 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SZT2→partner) and Y-score (partner→SZT2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADSKA1 →+0.742+2.335<.001<.00136
UCECOIP5 →+0.767+1.390<.001<.00135
COADWDR45B →+0.278+2.013.001<.00135
UCECCHAF1B →+0.611+1.540<.001<.00135
STADZNF511 →+0.580+3.712<.001<.00135
SKCMTNFAIP8L3 →-0.410-1.445.004.00535
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,910 associations by consensus.

Exploration