SYTL2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SYTL2 protein abundance is significantly associated with the RNA expression of many other genes, with 21,340 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SYTL2-associated genes across cancer lineages are ZBTB7C, STS, and ITGA3. Each is linked with SYTL2 in more than 5 cancer types. Because this analysis shows association rather than direction, both SYTL2-to-partner and partner-to-SYTL2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SYTL2 versus ZBTB7C in BRCA, with a Pearson correlation of 0.35.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SYTL2→partner) and Y-score (partner→SYTL2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAZBTB7C →+1.407+0.667<.001.00136
CCRCCSTS →+0.676+0.515.001<.00135
LSCCITGA3 →+1.250+0.408<.001.00135
BRCABCAS1 →+2.429+0.787<.001<.00135
LUADDHRS7 →+0.654+0.698<.001<.00135
BRCANCAPD2 →-0.975-0.880<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 21,340 associations by consensus.

SYTL2 vs ZBTB7C — BRCA

Per-sample scatter of SYTL2 vs ZBTB7C in BRCA (Pearson r = 0.35).

Explore this scatter interactively →

Exploration