SYT6

Across TCGA patient cohorts, SYT6 RNA expression is significantly associated with the RNA expression of many other genes, with 15,705 significant associations in total. THYM shows the largest number of these associations.

The most reproducible SYT6-associated genes across cancer lineages are OLFML3, RTN1, and CX3CR1. Each is linked with SYT6 in more than 26 cancer types. Because this analysis shows association rather than direction, both SYT6-to-partner and partner-to-SYT6 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SYT6 versus OLFML3 in BLCA, with a Pearson correlation of 0.23.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SYT6→partner) and Y-score (partner→SYT6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BLCA	OLFML3 →	+2.636	+0.185	<.001	<.001	3	27
PAAD	RTN1 →	+1.095	+0.330	<.001	<.001	3	23
THYM	CX3CR1 →	+2.009	+0.450	<.001	<.001	3	23
UVM	GAL3ST4 →	+1.510	+0.322	<.001	.003	3	23
LAML	TMEM121B →	+1.164	+0.328	<.001	<.001	3	23
UVM	RGL1 →	+1.449	+0.246	<.001	.006	2	23

Each partner links to its Q-omics profile. Showing the 6 strongest of 15,705 associations by consensus.

SYT6 vs OLFML3 — BLCA

Explore this scatter interactively →