SYPL2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SYPL2 protein abundance is significantly associated with the RNA expression of many other genes, with 1,684 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible SYPL2-associated genes across cancer lineages are RPL37P12, TRIM54, and PAQR7. Each is linked with SYPL2 in more than 1 cancer types. Because this analysis shows association rather than direction, both SYPL2-to-partner and partner-to-SYPL2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SYPL2 versus RPL37P12 in LSCC, with a Pearson correlation of -0.75.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SYPL2→partner) and Y-score (partner→SYPL2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCRPL37P12 →-0.993-0.728.005.00732
CCRCCTRIM54 →+2.510+0.934.002.00632
CCRCCPAQR7 →+0.728+1.030.001<.00132
HNSCLMOD3 →+1.983+1.990<.001<.00132
CCRCCSORBS1 →+0.976+0.909.004.00132
LSCCLRP5L →-0.992-0.653.002.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,684 associations by consensus.

SYPL2 vs RPL37P12 — LSCC

Per-sample scatter of SYPL2 vs RPL37P12 in LSCC (Pearson r = -0.75).

Explore this scatter interactively →

Exploration