SYNJ2

Across TCGA cell cohorts, SYNJ2 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,184 significant associations in total. BONE shows the largest number of these associations.

The most reproducible SYNJ2-associated GO terms across cancer lineages are Cellular response to environmental stimulus, Cellular response to abiotic stimulus, and Wound healing. Each is linked with SYNJ2 in more than 14 cancer types. Because this analysis shows association rather than direction, both SYNJ2-to-partner and partner-to-SYNJ2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Cellular response to environmental stimulus grouped by SYNJ2-low versus SYNJ2-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SYNJ2→partner) and Y-score (partner→SYNJ2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BONE	Cellular response to environmental stimulus →	+0.050	+1.899	.004	<.001	3	15
BONE	Cellular response to abiotic stimulus →	+0.050	+1.899	.004	<.001	3	15
BONE	Wound healing →	+0.139	+2.177	<.001	<.001	3	12
BONE	Establishment or maintenance of cytoskeleton polarity →	+0.213	+1.952	<.001	<.001	3	12
BONE	Regulation of plasma membrane repair →	+0.295	+1.433	<.001	<.001	3	11
BONE	Regulation of cell-substrate adhesion →	+0.161	+2.072	<.001	<.001	3	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,184 associations by consensus.

Cellular response to environmental stimulus by SYNJ2 expression — BONE

Explore this box plot interactively →