SYNGR1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SYNGR1 RNA expression is significantly associated with the protein abundance of many other proteins, with 22,983 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SYNGR1-associated proteins across cancer lineages are NAXD, PALM, and GSTM3. Each is linked with SYNGR1 in more than 5 cancer types. Because this analysis shows association rather than direction, both SYNGR1-to-partner and partner-to-SYNGR1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SYNGR1 versus NAXD in OV, with a Pearson correlation of 0.38.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SYNGR1→partner) and Y-score (partner→SYNGR1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVNAXD →+0.389+1.088<.001<.00136
GBMPALM →+0.608+1.076<.001<.00136
LSCCGSTM3 →+1.301+0.950<.001<.00136
OVEIF4G1 →-0.242-0.888<.001.00236
LSCCSEC24A →-0.292-0.648<.001<.00135
OVSEPTIN7 →+0.260+1.211<.001<.00126
Each partner links to its Q-omics profile. Showing the 6 strongest of 22,983 associations by consensus.

SYNGR1 vs NAXD — OV

Per-sample scatter of SYNGR1 vs NAXD in OV (Pearson r = 0.38).

Explore this scatter interactively →

Exploration