SYN2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SYN2 protein abundance is significantly associated with the RNA expression of many other genes, with 6,977 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SYN2-associated genes across cancer lineages are DYNC1I1, UNC13C, and PI16. Each is linked with SYN2 in more than 3 cancer types. Because this analysis shows association rather than direction, both SYN2-to-partner and partner-to-SYN2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SYN2 versus DYNC1I1 in UCEC, with a Pearson correlation of 0.63.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SYN2→partner) and Y-score (partner→SYN2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECDYNC1I1 →+2.928+1.254<.001<.00134
GBMUNC13C →+1.517+1.229<.001<.00133
LUADPI16 →+2.131+0.635.001.00133
GBMOPRM1 →+0.346+1.095<.001<.00133
BRCATMCC2 →+1.919+1.447<.001<.00133
UCECEPHA7 →+2.210+0.915<.001.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,977 associations by consensus.

SYN2 vs DYNC1I1 — UCEC

Per-sample scatter of SYN2 vs DYNC1I1 in UCEC (Pearson r = 0.63).

Explore this scatter interactively →

Exploration