SYMPK

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SYMPK protein abundance is significantly associated with the RNA expression of many other genes, with 15,691 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SYMPK-associated genes across cancer lineages are EXO1, IGFBP7, and PHYHIP. Each is linked with SYMPK in more than 6 cancer types. Because this analysis shows association rather than direction, both SYMPK-to-partner and partner-to-SYMPK results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SYMPK versus EXO1 in LSCC, with a Pearson correlation of 0.66.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SYMPK→partner) and Y-score (partner→SYMPK) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCEXO1 →+0.993+0.243<.001<.00137
GBMIGFBP7 →-0.811-0.249.001<.00136
GBMPHYHIP →-1.155-0.237.005<.00136
LUADMYBL2 →+1.219+0.147<.001<.00136
UCECASF1B →+0.837+0.146<.001<.00136
LSCCEZH2 →+0.963+0.232<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,691 associations by consensus.

SYMPK vs EXO1 — LSCC

Per-sample scatter of SYMPK vs EXO1 in LSCC (Pearson r = 0.66).

Explore this scatter interactively →

Exploration