SYCP3

Across TCGA cell cohorts, SYCP3 RNA expression is significantly associated with the go_rna of many other GO terms, with 1,504 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible SYCP3-associated GO terms across cancer lineages are Sulfur amino acid catabolic process, Co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway, and mRNA 5'-splice site recognition. Each is linked with SYCP3 in more than 5 cancer types. Because this analysis shows association rather than direction, both SYCP3-to-partner and partner-to-SYCP3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Sulfur amino acid catabolic process grouped by SYCP3-low versus SYCP3-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SYCP3→partner) and Y-score (partner→SYCP3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BONE	Sulfur amino acid catabolic process →	+0.199	+0.132	.002	.008	3	6
LARGE_INTESTINE	Co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway →	+0.069	+0.163	.007	.003	3	6
BLOOD_Leukemia	mRNA 5'-splice site recognition →	+0.088	+0.185	.001	<.001	3	6
BONE	Oxidative demethylation →	-0.151	-0.123	.001	.002	3	5
LUNG_NSCLC_LUSC	Nucleus localization →	+0.089	+0.236	.001	.005	3	5
URINARY_TRACT	Adenylate cyclase-activating adrenergic receptor signaling pathway →	-0.143	-0.142	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,504 associations by consensus.

Sulfur amino acid catabolic process by SYCP3 expression — BONE

Explore this box plot interactively →