SYCP1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SYCP1 RNA expression is significantly associated with the go_rna of many other GO terms, with 1,234 significant associations in total. BONE shows the largest number of these associations.

The most reproducible SYCP1-associated GO terms across cancer lineages are Mitochondrial RNA modification, Protein-containing complex disassembly, and Protein transport within lipid bilayer. Each is linked with SYCP1 in more than 2 cancer types. Because this analysis shows association rather than direction, both SYCP1-to-partner and partner-to-SYCP1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SYCP1→partner) and Y-score (partner→SYCP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADMitochondrial RNA modification →+0.043+0.025.002.00733
BLOOD_LymphomaProtein-containing complex disassembly →+0.041+0.013<.001.00633
BONEProtein transport within lipid bilayer →-0.891-3.617<.001.00233
BONEPositive regulation of DNA recombination →+0.105+4.486.001<.00133
BONEMaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) →+0.148+3.487.001.00433
BONEResponse to arsenic-containing substance →+0.085+3.035<.001.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,234 associations by consensus.

Exploration