SYBU

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SYBU mutation is significantly associated with the RNA expression of many other genes, with 31 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SYBU-associated genes across cancer lineages are MMP27, FSHR, and CCDC195. Each is linked with SYBU in more than 1 cancer types. Because this analysis shows association rather than direction, both SYBU-to-partner and partner-to-SYBU results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MMP27 grouped by SYBU-low versus SYBU-high in OESOPHAGUS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SYBU→partner) and Y-score (partner→SYBU) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSMMP27 →+0.006+4.906<.001.00631
OESOPHAGUSFSHR →+0.013+4.906<.001.00631
OESOPHAGUSCCDC195 →+0.043+4.906<.001.00631
CNSPYDC1 →+0.156+4.754<.001.00531
CNSKRTAP29-1 →+0.101+4.643<.001.00331
BLOOD_LeukemiaCST8 →+0.031+3.969<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 31 associations by consensus.

MMP27 by SYBU expression — OESOPHAGUS

Box plot of MMP27 in SYBU-low vs SYBU-high samples in OESOPHAGUS.

Explore this box plot interactively →

Exploration