SWI5

mass-spec protein — tumor vs normal
Tumor vs Normalmass-specBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, SWI5 mass-spec protein differs between tumor and matched normal tissue in 3 of 18 cancer types tested, making tumor–normal expression one of SWI5’s most consistent transcriptional readouts.

The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where SWI5 mass-spec protein is more highly expressed in tumor relative to normal tissue. In most cancer types SWI5 is over-expressed in tumor, although a few such as LUAD show the opposite, repressed pattern.

CCRCC, LUAD, and PDAC are the cancer types where SWI5 tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in SWI5 mass-spec protein (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
CCRCCAllIII,IV+0.534<.0019view →
LUADAllAll−0.286.0012view →
PDACAllAll+0.150.0331view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 3 strongest of 3 lineages.

SWI5–CCRCC

Tumor-vs-normal mass-spec protein box plot for SWI5 in CCRCC.

Open the CCRCC breakdown →

Exploration