SUN3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SUN3 mutation is significantly associated with the RNA expression of many other genes, with 1,258 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SUN3-associated genes across cancer lineages are RN7SL291P, SKA1, and C18orf54. Each is linked with SUN3 in more than 2 cancer types. Because this analysis shows association rather than direction, both SUN3-to-partner and partner-to-SUN3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL291P grouped by SUN3-low versus SUN3-high in HNSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SUN3→partner) and Y-score (partner→SUN3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCRN7SL291P →+0.135+3.953<.001.00233
UCECSKA1 →+0.733+2.332.001.00333
UCECC18orf54 →+0.573+2.321.005.00633
SKCMRNU7-141P →+0.307+2.931.006.00633
UCECNOL12 →+0.381+3.032.001<.00132
UCECRPS29P32 →+0.453+2.221<.001.00832
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,258 associations by consensus.

RN7SL291P by SUN3 expression — HNSC

Box plot of RN7SL291P in SUN3-low vs SUN3-high samples in HNSC.

Explore this box plot interactively →

Exploration