STOM

Across TCGA patient cohorts, STOM protein abundance is significantly associated with the RNA expression of many other genes, with 15,037 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible STOM-associated genes across cancer lineages are CXCR2, S100A12, and BCL2A1. Each is linked with STOM in more than 7 cancer types. Because this analysis shows association rather than direction, both STOM-to-partner and partner-to-STOM results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, STOM versus CXCR2 in UCEC, with a Pearson correlation of 0.37.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (STOM→partner) and Y-score (partner→STOM) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	CXCR2 →	+1.063	+0.436	<.001	.003	3	8
HNSC	S100A12 →	+1.980	+0.331	<.001	<.001	3	7
GBM	BCL2A1 →	+1.165	+0.499	<.001	<.001	3	6
LSCC	FCGR3B →	+1.186	+0.453	<.001	<.001	3	6
LSCC	CXCR1 →	+1.023	+0.514	<.001	<.001	3	6
UCEC	MIR223HG →	+1.033	+0.436	<.001	.008	2	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 15,037 associations by consensus.

STOM vs CXCR2 — UCEC

Explore this scatter interactively →