STMN2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, STMN2 protein abundance is significantly associated with the RNA expression of many other genes, with 4,680 significant associations in total. GBM shows the largest number of these associations.

The most reproducible STMN2-associated genes across cancer lineages are YPEL1, SOX10, and NEFH. Each is linked with STMN2 in more than 1 cancer types. Because this analysis shows association rather than direction, both STMN2-to-partner and partner-to-STMN2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, STMN2 versus YPEL1 in GBM, with a Pearson correlation of 0.39.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (STMN2→partner) and Y-score (partner→STMN2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMYPEL1 →+0.503+0.812.003.00432
GBMSOX10 →+1.587+1.103<.001<.00132
GBMNEFH →+1.041+0.889<.001<.00132
GBMCHADL →+1.791+1.578<.001<.00132
PDACCHGA →+2.121+0.550<.001.00132
GBMGALNT16 →+0.849+1.046<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,680 associations by consensus.

STMN2 vs YPEL1 — GBM

Per-sample scatter of STMN2 vs YPEL1 in GBM (Pearson r = 0.39).

Explore this scatter interactively →

Exploration