STK31

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, STK31 mutation is significantly associated with the RNA expression of many other genes, with 62 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible STK31-associated genes across cancer lineages are GPR171, DEFA1, and PABPN1L. Each is linked with STK31 in more than 1 cancer types. Because this analysis shows association rather than direction, both STK31-to-partner and partner-to-STK31 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (STK31→partner) and Y-score (partner→STK31) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSGPR171 →+0.070+3.584.004.00831
OESOPHAGUSDEFA1 →+0.071+3.392<.001.00731
SKINPABPN1L →+0.020+3.678<.001.00131
LARGE_INTESTINEVAPA →+0.620+3.502<.001.00131
LARGE_INTESTINEBET1 →+0.434+2.451.007.00931
LARGE_INTESTINEBLVRA →+1.373+2.451.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 62 associations by consensus.

Exploration